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Species belonging to selected taxon:
Medicago sativa
,
Medicago truncatula
ABOUT THIS RECORD
ID:
MNEST008428
species:
Medicago truncatula
miRNA family:
MIR414
source:
miRNEST
Taxonomy by NCBI:
Medicago truncatula
Medicago
Trifolieae
Papilionoideae
Fabaceae
Fabales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCATCGTCATCATCATCATCG
miRNA*
GTGAAGGAAGTGTGGTTGCT
mismatches:
4
bulges:
1
View larger
pre-miRNA
CTGTCATCGTCATCGTCATCGTCATCG
TCATCGTCATCATCATCATCG
GAAAGTAAAAATAAGTTAGCACTGAACATGGGTAAAAGTAAAACAATTGAGT
TGTATGGATTCCCTTCTTTTGTGAACGTGTCTCAAGTAAAGATATTTGTAGAGCATTATACCG
GTGAAGGAAGTGTGGTTGCT
ATGAAGATTAGAGTAGG
CAATGGC
dot-bracket secondary structure
..(((((.(((.((...(((.((((.(
(.((((.(((..((.((((((
(...((((......(((.(((..(((...(((.....(((.(((......))
).))).....))))))...))).))).(((((((((((....)))))).))).)))))).)))
)))).))..))))))).)).
)))).)))..))...))
).)))))
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
sp|Q9LQV2|RDR1_ARATH: 0.0005
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record