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Species belonging to selected taxon:

Medicago sativa, Medicago truncatula



ABOUT THIS RECORD

ID: MNEST008429
species: Medicago truncatula
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCATCGTCATCGTCATCATCA

miRNA*
GAAGTGTGGTTGCTATGAAG

mismatches: 5
bulges: 1

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pre-miRNA
CTGTCATCGTCATCGTCATCGTCATCGTCATCGTCATCATCATCATCGGAAAGTAAAAATAAGTTAGCACTGAACATGGGTAAAAGTAAAACAATTGAGT
TGTATGGATTCCCTTCTTTTGTGAACGTGTCTCAAGTAAAGATATTTGTAGAGCATTATACCGGTGAAGGAAGTGTGGTTGCTATGAAGATTAGAGTAGG
CAATGGC


dot-bracket secondary structure
..(((((.(((.((...(((.((((.((.((((.(((..((.(((((((...((((......(((.(((..(((...(((.....(((.(((......))
).))).....))))))...))).))).(((((((((((....)))))).))).)))))).))))))).))..))))))).)).)))).)))..))...))
).)))))



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt sp|Q9LQV2|RDR1_ARATH: 0.0005

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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