miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Brachionus plicatilis



ABOUT THIS RECORD

ID: MNEST009133
species: Brachionus plicatilis
miRNA family: mir-392
source: miRNEST

Taxonomy by NCBI:
Brachionus plicatilis Brachionus Brachionidae Ploimida Monogononta Rotifera Pseudocoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTTCATCGATCATGTGATCTC

miRNA*
GATCGAATGATTGATGAAATA

mismatches: 3
bulges: 0

View larger
pre-miRNA
AATTGATCGAATGATTGATGAAATATCAACTGATTGTTGAGCACTGGGCCGTCTGAATTCGACTCAGAGCACAGTCAAAAATTTGATATTGAAACCGAAT
TAAATGATATTAATTCTTTTAAATTTGAAAATCATTTTAATTTAGATTTACTTTTCATCGATCATGTGATCTCA


dot-bracket secondary structure
....(((((.((((((((((((((((((..(((((((...((.(((((.((........)).))))).)))))))))..((((((..........)))))
)...))))).(((.(((.(((((..(((...))).)))))...))).)))..))))))))))))).)))))...



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record





Liczniki na strone;