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Species belonging to selected taxon:
Mus musculus
,
Mus musculus
ABOUT THIS RECORD
ID:
MNEST032624
species:
Mus musculus
source:
miRBase, original name:
mmu-mir-5123
(
MI0018034
)
Taxonomy by NCBI:
Mus musculus
Mus
Mus
Murinae
Muridae
Muroidea
Sciurognathi
Rodentia
Glires
Euarchontoglires
Eutheria
Theria
Mammalia
Amniota
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGTAGATCCATATGCCATGGTGTG
miRNA*
TGCCATGGTGTGTAGATCCATATG
mismatches:
2
bulges:
0
View larger
pre-miRNA
CATA
TGCCATGGTG
TGTAGATCCATATG
CCATGGTGTG
TAGACCCATATGCCATGGTGTGTAGATCCATATGCCATGGTGTGT
dot-bracket secondary structure
.(((
((((((((((
(((.((((.(((((
((((((((((
(......)))))))))))))))).)))).))))))))))))))))
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
Solexa
references
[
1
] Spierings DC, McGoldrick D, Hamilton-Easton AM, Neale G, Murchison EP, Hannon GJ, Green DR, Withoff S,
Blood. [Epub prior to print](2011).
,
"Ordered progression of stage specific miRNA profiles in the mouse B2 B cell lineage"