ABOUT THIS RECORDspecies: Eucalyptus globulus
source: microPC, original name: miR169
Taxonomy by NCBI:
Eucalyptus globulus Eucalyptus Myrtaceae Myrtales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AGCCAAGGATGACTTGCCGA miRNA* GGCAAGTTGTTCTTGGCT mismatches: 2 bulges: 0 |
pre-miRNA
AGCCAAGGATGACTTGCCGACTCTCTTTCTTCCTATTTATTTGGATTGGATCTATCTCCGTGTATGTTAAATTAATGGAAATAATGAAGTTGGCAAGTTG
TTCTTGGCT
dot-bracket secondary structure
(((((((((..(((((((((((.((((..((((.(((.((((((..((((......))))......)))))).)))))))..)).)))))))))))))..
)))))))))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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AGCCAAGGATGACTTGCCGACTCTCTTTCTTCCTATTTATTTGGATTGGATCTATCTCCGTGTATGTTAAATTAATGGAAATAATGAAGTTGGCAAGTTG
TTCTTGGCT
dot-bracket secondary structure
(((((((((..(((((((((((.((((..((((.(((.((((((..((((......))))......)))))).)))))))..)).)))))))))))))..
)))))))))
SIMILARITIES| miRBase vvi-MIR169g: 0.00000009 PMRD vvi-miR169g: 0.00000009 microPC miR169: 3e-57 | UniProt no hits RFAM MIR169_2: 0.000002 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record
