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Species belonging to selected taxon:

Eucalyptus globulus, Eucalyptus gunnii



ABOUT THIS RECORD

ID: MNEST000572
species: Eucalyptus globulus
miRNA family: MIR169
source: miRNEST

Taxonomy by NCBI:
Eucalyptus globulus Eucalyptus Myrtaceae Myrtales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CAGCCAAGGATGACTTGCCGA

miRNA*
 GGCAAGTTGTTCTTGGCTACA

mismatches: 1
bulges: 0
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pre-miRNA
 TGCGTGTAGGTGTCGAAAGCATGTTGTGCAGCCAAGGATGACTTGCCGACTCTCTTTCTTCCTATTTATTTGGATTGGATCTATCTCCGTGTATGTTAAA
TTAATGGAAATAATGAAGTTGGCAAGTTGTTCTTGGCTACATGCTTCTTTCCGCTCCACATGCCAG

dot-bracket secondary structure
.((((((.((.((.((((((((((.....((((((((((((((((((((((.((.((.((.(((((.((((((..((((......))))......)))))
).))))).)).)).)))))))))))))))))))))))))))))))...))).)).))))))))...


SIMILARITIES
miRBase vvi-MIR169g: 0.0000000006

PMRD vvi-miR169g: 0.0000000006

microPC miR169: 1e-57		UniProt no hits

RFAM MIR169_2: 0.00000001		most similar mature miRNAs

Identical with: miR169 from microPC (MNEST046292)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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