miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Aedes aegypti, Culex quinquefasciatus, Anopheles gambiae, Phlebotomus papatasi, Lutzomyia longipalpis, Anopheles stephensi, Polypedilum vanderplanki



ABOUT THIS RECORD

ID: MNEST035290
species: Anopheles gambiae
miRNA family: mir-125
source: miRBase, original name: aga-mir-125 (MI0001605)

Taxonomy by NCBI:
Anopheles gambiae gambiae species complex Pyretophorus Cellia Anopheles Anophelinae Culicidae Culicoidea Culicimorpha Nematocera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCCCTGAGACCCTAACTTGTGA

miRNA*
ACAAGTTTTGATCTCCGGTATT

mismatches: 6
bulges: 0

View larger
pre-miRNA
TATTGTTTCGTTTTTTTGTATCTGCTGATTCCCTGAGACCCTAACTTGTGACTATCGTTGCAAAGTTTCACAAGTTTTGATCTCCGGTATTAGCGGTTGA
GATGCAACGGTA


dot-bracket secondary structure
(((((((.((((((.......((((((((..((.((((.(..(((((((((....(........)..)))))))))..).)))).)).))))))))..))
)))).)))))))



SIMILARITIES
miRBase aae-mir-125: 2e-30

PMRD no hits

microPC no hits
UniProt no hits

RFAM lin-4: 9e-33

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record





Liczniki na strone;