miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Bicyclus anynana, Bombyx mori, Spodoptera frugiperda, Heliothis virescens, Antheraea assama, Spodoptera littoralis, Samia cynthia ricini, Danaus plexippus, Papilio xuthus, Ostrinia nubilalis, Trichoplusia ni



ABOUT THIS RECORD

ID: MNEST035616
species: Bombyx mori
source: miRBase, original name: bmo-mir-2752 (MI0012204)

Taxonomy by NCBI:
Bombyx mori Bombyx Bombycinae Bombycidae Bombyciformes Bombycoidea Obtectomera Ditrysia Heteroneura Neolepidoptera Glossata Lepidoptera Amphiesmenoptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CTCAACACGATGGCCACGGA

miRNA*
CGCGGCGACAGCGACGTCGATTGACCA

mismatches: 3
bulges: 9

View larger
pre-miRNA
GGGTAACGCCGCGGACTGTCTCAACACGATGGCCACGGAGCCGTCGACGTCCCCGATCCAGCAGTCCTGGTCGGTGGGGACGAAGTACGGCTCCGCGGCG
ACAGCGACGTCGATTGACCA
CTCCGCCATGGTGTGGACG


dot-bracket secondary structure
..((.((((((((((.((..((((..((((((((.((((((((((..((((((((..((((.....))))....))))))))..).))))))))).))).
.......))))).)))).))
.)))))...)))))..)).



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned, RT-PCR

references

[1] Yu X, Zhou Q, Cai Y, Luo Q, Lin H, Hu S, Yu J, Genomics. 94:438-444(2009)., "A discovery of novel microRNAs in the silkworm (Bombyx mori) genome"




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