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Species belonging to selected taxon:

Bicyclus anynana, Bombyx mori, Spodoptera frugiperda, Heliothis virescens, Antheraea assama, Spodoptera littoralis, Samia cynthia ricini, Danaus plexippus, Papilio xuthus, Ostrinia nubilalis, Trichoplusia ni



ABOUT THIS RECORD

ID: MNEST035640
species: Bombyx mori
miRNA family: mir-2774
source: miRBase, original name: bmo-mir-2774a-2 (MI0012347)

Taxonomy by NCBI:
Bombyx mori Bombyx Bombycinae Bombycidae Bombyciformes Bombycoidea Obtectomera Ditrysia Heteroneura Neolepidoptera Glossata Lepidoptera Amphiesmenoptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CTCGGTGGAAGATCGTCCCT

miRNA*
GGACCGTCGGTCTACCGAGCA

mismatches: 4
bulges: 1

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pre-miRNA
ACAACAACATTCGGACCGTCGGTCTACCGAGCAATATCACCCGCTCGGTGGAAGATCGTCCCTTTGTCATTAT

dot-bracket secondary structure
......(((...((((.(((..((((((((((..........)))))))))).))).))))...)))......


SIMILARITIES
miRBase bmo-mir-2774a-4: 3e-28

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-2774: 3e-25

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa
deep sequencing data evidence

references

[1] Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q, BMC Genomics. 11:148(2010)., "MicroRNAs of Bombyx mori identified by Solexa sequencing"




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