miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Bicyclus anynana, Bombyx mori, Spodoptera frugiperda, Heliothis virescens, Antheraea assama, Spodoptera littoralis, Samia cynthia ricini, Danaus plexippus, Papilio xuthus, Ostrinia nubilalis, Trichoplusia ni



ABOUT THIS RECORD

ID: MNEST007182
species: Bombyx mori
miRNA family: mir-2807
source: miRNEST

Taxonomy by NCBI:
Bombyx mori Bombyx Bombycinae Bombycidae Bombyciformes Bombycoidea Obtectomera Ditrysia Heteroneura Neolepidoptera Glossata Lepidoptera Amphiesmenoptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CAACTGCATACAAAATTGAGT

miRNA*
TTATATTTGTATGGAATGGG

mismatches: 5
bulges: 1

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pre-miRNA
AAGCTTCCGATTAATGTGCTTAGTGCGAGTTTTTTAAAGTTCTCGATAGCGTTAAAGTCAGCTTATATTTGTATGGAATGGGATCGTTTGCCTACGTTGG
TTGCTAGGCGCGCTGTTCCAACTGCATACAAAATTGAGTTAACTTTTACGCTAACGAGAACGTTAAAAAACTCGCACTAAGCACATAGATGTCGGTGG


dot-bracket secondary structure
...((.(((((..((((((((((((((((((((((((.(((((((.((((((.(((((.((((((..((((((((...((((((.((.((((((.((...
..)))))))).)).))))))....))))))))..)))))).))))).)))))).))))))).))))))))))))))))))))))))....))))).))



SIMILARITIES
miRBase bmo-mir-2807d: 8e-28

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-2807: 2e-29
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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