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Species belonging to selected taxon:

Striga hermonthica, Triphysaria pusilla, Triphysaria versicolor



ABOUT THIS RECORD

ID: MNEST002684
species: Striga hermonthica
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Striga hermonthica Striga Buchnereae Orobanchaceae Lamiales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CCATCATCATCATCATCGTCG

miRNA*
 ATTACATTGATGAATGATGATACAT

mismatches: 5
bulges: 1
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pre-miRNA
 CTACATAGTGATAATTACATTGATGAATGATGATACATAATGCAACTCGAGTCCCACCATCATCATCATCATCGTCGTCACCACCAA

dot-bracket secondary structure
.......(((((....((..((((((.(((((((........................)))))))))))))..)).)))))......


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM mir-598: 0.00007		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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