miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Oryza sativa



ABOUT THIS RECORD

ID: MNEST001805
species: Oryza sativa
miRNA family: MIRf10
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CTCAAAAGATTCGTCTCGCAA

miRNA*
GCGAGACGAGTTCATTAAGCC

mismatches: 4
bulges: 0

View larger
pre-miRNA
ACCAAATAAATTATAGATTCTACCTGTAAACTGCGAGACGAGTTCATTAAGCCTAATTAATTCGTCATTAGCAAATGTTTACTGTAGCACCACATTGTCA
AATCACGGCGCNATTAGGCTCAAAAGATTCGTCTCGCAATTTACATGCAAACTGTACNNCTGATTTTT


dot-bracket secondary structure
...........(((((.((.((..((((((.(((((((((((((..((.((((((((....((((.(((....(((((.............)))))....
))).))))....)))))))).))..))))))))))))).)))))))).)).)))))............



SIMILARITIES
miRBase osa-MIR442: 2e-46

PMRD osa-miR442: 2e-46

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
Source sequences
download this record





Liczniki na strone;