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Species belonging to selected taxon:

Oryza sativa



ABOUT THIS RECORD

ID: MNEST000713
species: Oryza sativa
miRNA family: MIRf75
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGCGAGACGAATCTTTTAAGT

miRNA*
TTAATAAATTCATCTCGCAGT

mismatches: 4
bulges: 0

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pre-miRNA
TTACACAGTTCATAAGGAAATTGCGAGACGAATCTTTTAAGTGTNATTGCGTCATGATTTGACAATGTGGTGTTACAGGTAAACATTTGCTAATGACAAA
TTAATTAGGCTTAATAAATTCATCTCGCAGTTTTCTGGCGGAG


dot-bracket secondary structure
.........((...((((((((((((((.((((...((((((((.(((..(((((....(((((......)))))..(((((....))))).))))).))
)..))...))))))...)))).))))))))))))))....)).



SIMILARITIES
miRBase osa-MIR2124d: 3e-36

PMRD osa-miR442: 2e-33

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
Source sequences
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