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Species belonging to selected taxon:
Cynodon dactylon
,
Eragrostis curvula
,
Panicum virgatum
,
Saccharum hybrid cultivar CoS 767
,
Saccharum hybrid cultivar SP70-1143
,
Saccharum officinarum
,
Sorghum propinquum
,
Cenchrus ciliaris
,
Zea mays
,
Sorghum bicolor
ABOUT THIS RECORD
ID:
MNEST008499
species:
Sorghum bicolor
miRNA family:
miR156a
source:
miRNEST
Taxonomy by NCBI:
Sorghum bicolor
Sorghum
Andropogoneae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CCTCCCTTCTCTCTCTGTCTA
miRNA*
GGCAAGGAAGGAGGCCGAAAAT
mismatches:
5
bulges:
1
View larger
pre-miRNA
TTGTGGTCCGTG
GGCAAGGAAGGAGGCCGAAAAT
TGCATCAATGCC
CCTCCCTTCTCTCTCTGTCTA
TACCCCCTC
dot-bracket secondary structure
....(((..(((
((((.(((.(((((..((....
.(((....))).
..)).))))).))).))))))
)))).....
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record