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Species belonging to selected taxon:

Panicum virgatum, Cenchrus ciliaris



ABOUT THIS RECORD

ID: MNEST001792
species: Panicum virgatum
miRNA family: MIR160
source: miRNEST

Taxonomy by NCBI:
Panicum virgatum Panicum Paniceae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGCCTGGCTCCCTGTATGCCA

miRNA*
GCGTGCAAGGAGCCAAGCATG

mismatches: 2
bulges: 0

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pre-miRNA
TAGCTCGTGTGTGCCTGGCTCCCTGTATGCCACACATGTAGCCCAACCCGTGGCGCGATTGGATGCTGTGGGTGGCGTGCAAGGAGCCAAGCATGCAGAA
CAG


dot-bracket secondary structure
.......(((((((.(((((((.((((((((((...((((((((((..(((...))).))))..)))))).)))))))))).))))))).)))))))...
...



SIMILARITIES
miRBase zma-MIR160b: 8e-42

PMRD zma-miR160b: 8e-42

microPC miR160: 2e-24
UniProt no hits

RFAM mir-160: 2e-36
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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