miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Panicum virgatum, Cenchrus ciliaris



ABOUT THIS RECORD

ID: MNEST001796
species: Panicum virgatum
miRNA family: MIR164
source: miRNEST

Taxonomy by NCBI:
Panicum virgatum Panicum Paniceae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGGAGAAGCAGGGCACGTGCT

miRNA*
CACGTGCGCTCCTTCTCCATC

mismatches: 2
bulges: 0

View larger
pre-miRNA
GCCAATCTAGCTCATCTAGCATTCCATTTTTGCTTCAGTTGTTCGCAGTGCCTCATGAGGAGGGGCGAGCAAACCCCTGCTGGAGAAGCAGGGCACGTGC
T
TGGTCGATCGGCCGGCAGCCCGCTGCATGTGTGCATGGTCGATCGCAGCACGTGCGCTCCTTCTCCATCATGGATTCTCGCCCCGTCGATCCATCTCGG
TTCGAACGCCCCCTAATAAGCTAATGGGTGGGAGAGCTAGCTCGATC


dot-bracket secondary structure
......(((((((.(((.....((((((...((((.((.((((((....(((..(((.((.((((((((..((.((.((.((((((((.((.((((((((
(
..(.((((((((((...((.(((.....))).)).)))))))))))))))))))).)).)))))))).)).)).)))))))))).))....)))...))
).))))))....))...)))).))))))..)))))))))).......



SIMILARITIES
miRBase sbi-MIR164b: 0.000000000003

PMRD sbi-miR164b: 0.000000000003

microPC miR164: 0.0008
UniProt no hits

RFAM MIR164: 0.000001
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





Liczniki na strone;