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Species belonging to selected taxon:

Panicum virgatum



ABOUT THIS RECORD

ID: MNEST001798
species: Panicum virgatum
miRNA family: MIR2504
source: miRNEST

Taxonomy by NCBI:
Panicum virgatum Panicum Paniceae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTGACCAAGTTTATAGAAAAA

miRNA*
TTTCTATAAACTTTGTCAAAT

mismatches: 2
bulges: 0

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pre-miRNA
GAGATTGTTTTAGCTTTGTCCTAAGTCAAACTTCTTTAGCTTTGACCAAGTTTATAGAAAAATACATATATATCTTCAATATCAAACTAGTTTCAGTAGA
TAGACCCATGAAATATATTTTCATGGTGGCATTATATTTGATATTTTAGGTGTTAATATATTTTCTATAAACTTTGTCAAATTTAGACATGTTTGACTTG
GACAAAGCTAATACAACCCC


dot-bracket secondary structure
....((((.((((((((((((.(((((((((...(((((.((((((.((((((((((((((.((.((..((((((..(((((((((.((((.(((.....
.....((((((((.....))))))))))).))))..)))))))))..))))))..)).)))))))))))))))).)))))).)))))...))))))))))
))))))))))).))))....



SIMILARITIES
miRBase osa-MIR437: 1e-17

PMRD osa-miR437: 1e-17

microPC miR437: 0.0000002
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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