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Species belonging to selected taxon:

Papaver somniferum



ABOUT THIS RECORD

ID: MNEST001871
species: Papaver somniferum
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Papaver somniferum Papaver Papaveraceae Ranunculales stem eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCATCATCATCATCATCATCA

miRNA*
ATGAATGATGCTGCTGCTGCTG

mismatches: 5
bulges: 1

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pre-miRNA
AGCTTTGGGAATTCTTTGTGGATGAGGGATGTAACGTTGCTGATGGTGATATTGTTCAACTTCATCATCATCATCATCATCATGTGAATACGATGAATGA
TGCTGCTGCTGCTG
GTGATGTTTTGCCGGTTCAGTCACGTCACATACCCTACCATGCTTCTTTTGTTCCTTG


dot-bracket secondary structure
......((((((....(((((...((((((((.((((.(((((.(((((.((...(((.((.((.((.((.((((((((((..........)))).))))
)).)).)).))..)
)))).)).)))))...))))).)))).)))).)))).)))))........))))))..



SIMILARITIES
miRBase bdi-MIR156b: 0.0005

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-598: 0.0002
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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