miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST000100
species: Arachis duranensis
miRNA family: MIR408
source: miRNEST

Taxonomy by NCBI:
Arachis duranensis Arachis Dalbergieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CTGGGGACAGGCAGAGCATGA

miRNA*
 ATGCACTGCCTCTTCCCTGGCT

mismatches: 2
bulges: 1
View larger
pre-miRNA
 TAGCCAGAGAGAAAGAGAAGAGATGACAAAGACTGGGGACAGGCAGAGCATGAATGGAACTATCAATAGACACATTTGTTCACTGAGTTACAAAGGGAAA
CACACACATATACATACATAGATAAAGGCATGATACATCCATCATCTCATCTATTGTGGCTACGCTCATGCACTGCCTCTTCCCTGGCTCTCTCGTTCTT
TTTCCTTCTTTATTTATC

dot-bracket secondary structure
.......((((((.((((((.(((((...((((((((((.((((((.((((((.((...(((.(((((((.((....))....((((........(((..
.....................................))).....))))))))))))))...)).)))))).))))))..))))))).))).))))).))
)))).)))))).......


SIMILARITIES
miRBase ahy-MIR408: 2e-22

PMRD gma-miR408a: 0.00000000005

microPC miR408: 0.00000000000005		UniProt no hits

RFAM MIR408: 0.00000000000006		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record




Liczniki na strone;