ABOUT THIS RECORDspecies: Arachis duranensis
miRNA family: MIR396
source: miRNEST
Taxonomy by NCBI:
Arachis duranensis Arachis Dalbergieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AAGAAAGCTGTGGGAGAATAT miRNA* GCTTTTCCACAGCTTTCTTGA mismatches: 1 bulges: 0 |
pre-miRNA
GGTCATGCTTTTCCACAGCTTTCTTGAACTTCTTGTATGTGCATCCATCCATCTCAACTTCTTCTAAGTAAGTATGTAATTACAGTCTTATCCCTACAAC
TAATCAAGAAGCTCAAGAAAGCTGTGGGAGAATATGGC
dot-bracket secondary structure
.((((((.(((((((((((((((((((.(((((((..((((..........................(((((..(((....)))..)))))...))))..
....))))))).))))))))))))))))))).))))))
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
GGTCATGCTTTTCCACAGCTTTCTTGAACTTCTTGTATGTGCATCCATCCATCTCAACTTCTTCTAAGTAAGTATGTAATTACAGTCTTATCCCTACAAC
TAATCAAGAAGCTCAAGAAAGCTGTGGGAGAATATGGC
dot-bracket secondary structure
.((((((.(((((((((((((((((((.(((((((..((((..........................(((((..(((....)))..)))))...))))..
....))))))).))))))))))))))))))).))))))
SIMILARITIES| miRBase ptc-MIR396e: 0.000000000002 PMRD ptc-miR396e: 0.000000000002 microPC miR396: 0.000002 | UniProt no hits RFAM MIR396: 0.00000000003 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
