miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST000099
species: Arachis duranensis
miRNA family: MIR396
source: miRNEST

Taxonomy by NCBI:
Arachis duranensis Arachis Dalbergieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTCCACAGCTTTCTTGAACTT

miRNA*
GCTCAAGAAAGCTGTGGGAGA

mismatches: 1
bulges: 0

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pre-miRNA
TGGTCATGCTTTTCCACAGCTTTCTTGAACTTCTTGTATGTGCATCCATCCATCTCAACTTCTTCTAAGTAAGTATGTAATTACAGTCTTATCCCTACAA
CTAATCAAGAAGCTCAAGAAAGCTGTGGGAGAATATGGCA


dot-bracket secondary structure
..((((((.(((((((((((((((((((.(((((((..((((..........................(((((..(((....)))..)))))...)))).
.....))))))).))))))))))))))))))).)))))).



SIMILARITIES
miRBase gma-MIR396b: 0.0000000000005

PMRD gma-miR396b: 0.0000000000005

microPC miR396: 0.000002
UniProt no hits

RFAM MIR396: 0.00000000003
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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