miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST040671
species: Medicago truncatula
miRNA family: MIR166
source: miRBase, original name: mtr-MIR166d (MI0005582)

Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCGGGCCAGGCTTCATCCCCC

miRNA*
 GGAATGTTGCCTGGCTCAAGG

mismatches: 4
bulges: 0
View larger
pre-miRNA
 GTTGAGGGGAATGTTGCCTGGCTCAAGGCTTTTCATAGTTTGATCTATCTACTATGATTAAGGCTTCGGGCCAGGCTTCATCCCCCTCAAA

dot-bracket secondary structure
.((((((((.(((..(((((((((.((((((((((((((..((....)).)))))))..))))))).)))))))))..))).)))))))).


SIMILARITIES
miRBase ptc-MIR166f: 0.00000007

PMRD ptc-miR166f: 0.00000007

microPC miR166: 0.000004		UniProt no hits

RFAM mir-166: 2e-45

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record

references
[1] Bonnet E, Unpublished (2007).,



Liczniki na strone;