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Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST040689
species: Medicago truncatula
miRNA family: MIR169_2
source: miRBase, original name: mtr-MIR169l (MI0005631)

Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 AAGCCAAGGATGACTTGCCGG

miRNA*
 GGCAGGTCATCCTTCGGCTATA

mismatches: 1
bulges: 1
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pre-miRNA
 AGATGAAGCCAAGGATGACTTGCCGGTATAATAGTAATTTGCCACAAATCTAGATAGCTATTAGCTATGTTTGGATGGGCGGTGAGATTAACAAAATTAC
AGCAGCATTGTGATTTTGTTGATGCTTTAAAGTGTAGTTTTTATCAAAATTACAGTGGTTCACTGTAATTATGAGAATCTCACCGTCAATCTAAATATGC
ATTTAGTTTCATTTCCGGCAGGTCATCCTTCGGCTATATT

dot-bracket secondary structure
.((((.((((((((((((((((((((..(((((((.(((((.........))))).)))))))((.((((((((((.((((((((((((..((.((((((
((.(.(((((((((((((.(((.(((.........)))..))).))))))))))))).)...)))))))).))..)))))))))))).))))))))))))
..............)))))))))))))))).)))).))))


SIMILARITIES
miRBase mtr-MIR169d: 4e-135

PMRD gma-miR169c: 0.000003

microPC miR169: 0.00005		UniProt no hits

RFAM MIR169_2: 7e-134

Identical with: mtr-MIR169d from miRBase (MNEST040681)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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references
[1] Bonnet E, Unpublished (2007).,



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