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Species belonging to selected taxon:
Arachis duranensis
,
Arachis hypogaea
,
Arachis ipaensis
,
Glycine soja
,
Glycyrrhiza uralensis
,
Lotus japonicus
,
Medicago sativa
,
Phaseolus acutifolius
,
Phaseolus coccineus
,
Pisum sativum
,
Trifolium pratense
,
Cajanus cajan
,
Cicer arietinum
,
Glycine max
,
Vigna unguiculata
,
Medicago truncatula
,
Phaseolus vulgaris
ABOUT THIS RECORD
ID:
MNEST040741
species:
Medicago truncatula
miRNA family:
MIR399
source:
miRBase, original name:
mtr-MIR399k
(
MI0005592
)
Taxonomy by NCBI:
Medicago truncatula
Medicago
Trifolieae
Papilionoideae
Fabaceae
Fabales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGCCAAAGAAGATTTGCCCTG
miRNA*
GGGGAAATCTCTTTTGGCAGA
mismatches:
3
bulges:
0
View larger
pre-miRNA
AATGATA
GGGGAAATCTCTTTTGGCAGA
GAGGAGTAGCTAGAGAGCTTGAACATGCTTGCTTCTAGTT
TGCCAAAGAAGATTTGCCCTG
CCATT
dot-bracket secondary structure
((((.((
(((.((((((..(((((((((
.(((((((((................)).)))))))..))
)))))))..)))))).)))))
.))))
SIMILARITIES
miRBase
mtr-MIR399i
:
0.00000000000008
PMRD
mtr-miR399j
:
2e-42
microPC
no hits
UniProt
no hits
RFAM
mir-399: 3e-47
Identical with:
mtr-miR399j
from PMRD (
MNEST048758
)
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
references
[
1
] Bonnet E,
Unpublished (2007).
,