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Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST040743
species: Medicago truncatula
miRNA family: MIR399
source: miRBase, original name: mtr-MIR399m (MI0005608)

Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGCCAAAGGAGAGCTGCCCTA

miRNA*
 GGGCATGTCTCTATTGGCAGG

mismatches: 3
bulges: 0
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pre-miRNA
 AGTCATAGGGCATGTCTCTATTGGCAGGTGATATAGTGATATGGCTCTAGAAATTCACTTGCCAAAGGAGAGCTGCCCTATGAAT

dot-bracket secondary structure
..((((((((((..(((((.(((((((((((..(((.(......).))).....))))))))))).)))))..))))))))))..


SIMILARITIES
miRBase mtr-MIR399n: 7e-17

PMRD mtr-miR399d: 0.000000000000004

microPC miR399: 0.0002		UniProt no hits

RFAM mir-399: 0.00007

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record

references
[1] Bonnet E, Unpublished (2007).,



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