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Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST008366
species: Medicago truncatula
miRNA family: MIR399
source: miRNEST

Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGCCAAAGGAGAGCCGCCCTG

miRNA*
 GGGCATGTCTCTATTGGCAAG

mismatches: 4
bulges: 0
View larger
pre-miRNA
 AAATCAATCATAGGGCATGTCTCTATTGGCAAGTGATATGGTGATATTTCATTTGACATGGCGGCTCTAGAAATTCACTTGCCAAAGGAGAGCCGCCCTG
TGAGCGTTT

dot-bracket secondary structure
.......(((((((((...(((((.(((((((((((..(((...(((.((....)).)))......))).....))))))))))).)))))...))))))
)))......


SIMILARITIES
miRBase mtr-MIR399n: 7e-33

PMRD mtr-miR399d: 3e-32

microPC no hits		UniProt no hits

RFAM mir-399: 0.00009		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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