miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Species belonging to selected taxon:
Arachis duranensis
,
Arachis hypogaea
,
Arachis ipaensis
,
Glycine soja
,
Glycyrrhiza uralensis
,
Lotus japonicus
,
Medicago sativa
,
Phaseolus acutifolius
,
Phaseolus coccineus
,
Pisum sativum
,
Trifolium pratense
,
Cajanus cajan
,
Cicer arietinum
,
Glycine max
,
Vigna unguiculata
,
Medicago truncatula
,
Phaseolus vulgaris
ABOUT THIS RECORD
ID:
MNEST008388
species:
Medicago truncatula
miRNA family:
MIRf341
source:
miRNEST
Taxonomy by NCBI:
Medicago truncatula
Medicago
Trifolieae
Papilionoideae
Fabaceae
Fabales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TATACTCCCTCCGTCCCAAAT
miRNA*
TTGGGACGGAGGGAGTATAAC
mismatches:
0
bulges:
0
View larger
pre-miRNA
ACNNATTG
TATACTCCCTCCGTCCCAAAT
TGTATGTCACTTAGGAAAAAATATTTGTCCCAAATTGTATGTTGCTTTACAATACCAATGAAAAATTAATG
TTACTTTTCCTATTATATCCTTAACTATTTATTACTCTCTCTTCTTTCAATTCCTTCATTTATCTTTTTCATATCATTTATTGAGGACAATTTTGTAAAA
CAACTCATAATATCTCTTTCCCACACAATATTAATTACATTTCTTAATATGTGTGAAATGCCCAAAACGTCATACAAT
TTGGGACGGAGGGAGTATAAC
A
TTGG
dot-bracket secondary structure
........
(((((((((((((((((((((
((((((.((.((.(((((..(((((..........((...((((.(((((((..((.((((((((..((((
........................................................))))....)))))))).(((.....)))))......))))))).
)))).)).)))))...)))))((((((.((((((.........)))))))))))))).))..........))))))))
)))))))))))))))))))..
.
....
SIMILARITIES
miRBase
tae-MIR1122
:
0.0002
PMRD
osa-miRf10322-akr
:
0.00006
microPC
no hits
UniProt
no hits
RFAM
MIR806: 0.0003
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
Source sequences
download this record