miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Sparus aurata, Dicentrarchus labrax, Perca flavescens, Lates calcarifer



ABOUT THIS RECORD

ID: MNEST009553
species: Perca flavescens
miRNA family: miR-3214
source: miRNEST

Taxonomy by NCBI:
Perca flavescens Perca Percinae Percidae Percoidei Perciformes Percomorpha Euacanthopterygii Acanthopterygii Holacanthopterygii Euacanthomorpha Acanthomorpha Ctenosquamata Eurypterygii Neoteleostei Neognathi Euteleostei Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AAGATAGATAGAAAGATAGAA

miRNA*
CTATTGACCTTTCATCTCTA

mismatches: 5
bulges: 1

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pre-miRNA
TAGATCCGTGTTCTATTGACCTTTCATCTCTATTGATCTCTCGCCTCTGCCTGGTTCATGTGTGTTTGACATGTTTCTGCTACTATAATTGACTGTATAA
ATATACATAAAAAAAAATATATATATATATAAATTGAGATTGATATTACCAAGATAGATAGAAAGATAGAACAAGAGAAA


dot-bracket secondary structure
....((..(((((((((...((.((((((.(((((((((((((.....((..((..(((((.......)))))..)).)).........))).((((((.
(((((.((........)).))))).))))))....))))))))))......)))).)).))...))))))))).))....



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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