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Species belonging to selected taxon:
Mimulus guttatus
,
Mimulus guttatus var. nasutus
,
Mimulus lewisii
ABOUT THIS RECORD
ID:
MNEST001561
species:
Mimulus guttatus
miRNA family:
MIRf1542
source:
miRNEST
Taxonomy by NCBI:
Mimulus guttatus
Mimulus
Phrymaceae
Lamiales
lamiids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGACTTGGCGCTGAGGTGTGT
miRNA*
AATCCACACGCTGAGTCAGC
mismatches:
4
bulges:
1
View larger
pre-miRNA
AGGCAGCGTCGAAAAGTTTGC
TGACTTGGCGCTGAGGTGTGT
CCAAGAATCGGGCGATAGCAGGCCCACGATGAATGAGGTGGCGAAGGAGATCGAAAAC
ATCATGGAATCGGCCGGTCTC
AATCCACACGCTGAGTCAGC
ATCGACTTCGACAG
dot-bracket secondary structure
.......(((((..(((((((
((((((((((.((.((..((.
((.......((((........)))).((((..((((.((..(((......)))...))
.))))...))))...))...)
)..)).))))))))))))))
)..)))))))))..
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
sp|Q9LT96|Y5977_ARATH: 0.00000004
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record