miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Mimulus guttatus, Mimulus guttatus var. nasutus, Mimulus lewisii



ABOUT THIS RECORD

ID: MNEST001572
species: Mimulus guttatus
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Mimulus guttatus Mimulus Phrymaceae Lamiales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCATCTTCATCATCTTCGTCA

miRNA*
ATGAAGAGGAAGAAGAAAAGATC

mismatches: 4
bulges: 2

View larger
pre-miRNA
CTTCTTCATCTTCATCTTCATCATCTTCGTCACGCGGCACGATGAGCCAGTATGCATCGGCGGCGAGCCTTCGAGATCTGTATAACAGCAGCGACGATGA
AGAGGAAGAAGAAAAGATC
CAGATGAG


dot-bracket secondary structure
.....((((((((.(((((.((.((((((((.(((.((.(((((..........))))))).))).....(((....((((...))))...))).)))))
))).)).)))))...))..
.)))))).



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-598: 0.0001
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record





Liczniki na strone;