miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Schistosoma mansoni, Schistosoma japonicum, Taenia solium, Schmidtea mediterranea



ABOUT THIS RECORD

ID: MNEST007487
species: Schistosoma mansoni
miRNA family: miR-4000i
source: miRNEST

Taxonomy by NCBI:
Schistosoma mansoni Schistosoma Schistosomatidae Schistosomatoidea Strigeidida Digenea Trematoda Platyhelminthes Acoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GATGTTATTTCAAGTTTTACC

miRNA*
TAAAACGTGAGAGAAAAGTTAA

mismatches: 5
bulges: 1

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pre-miRNA
AGCATGAGTATGATGTTATTTCAAGTTTTACCTTAACAGATCGCCAGATAATAAAACGTGAGAGAAAAGTTAATGAGTGGA

dot-bracket secondary structure
..(((..((.((((.((.(((((.((((((.........(((....)))..)))))).))))).))..))))))..)))..


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record





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