miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Petrolisthes cinctipes, Homarus americanus, Eriocheir sinensis, Carcinus maenas, Callinectes sapidus



ABOUT THIS RECORD

ID: MNEST008787
species: Petrolisthes cinctipes
miRNA family: miR-1603
source: miRNEST

Taxonomy by NCBI:
Petrolisthes cinctipes Petrolisthes Porcellanidae Galatheoidea Anomura Pleocyemata Decapoda Eucarida Eumalacostraca Malacostraca Crustacea Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GTGTTTTGTTTTGTGTTTTCA

miRNA*
GTCACATGAAACTTGACACAT

mismatches: 4
bulges: 0

View larger
pre-miRNA
GTAGATACAACCGTGGGTACAAATTCAGATTGGTCACATGAAACTTGACACATAAGTATAGAACAGTATATAATATAGGTATAGGATATGAGACGTTATT
TTGTTTTGTTTTATTGTGTTTTGTTTTGTGTTTTCAGTATTTATTTGGGAGATCACAAGCAATCG


dot-bracket secondary structure
............((((...(((((....(((((..(((((((((..((((((..((.(((((((((...(((((.....((((...))))....))))).
))))))))).))..))))))..)))))))))..)))))....))))).....)))).........



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





Liczniki na strone;