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Species belonging to selected taxon:

Petrolisthes cinctipes, Homarus americanus, Eriocheir sinensis, Carcinus maenas, Callinectes sapidus



ABOUT THIS RECORD

ID: MNEST008792
species: Petrolisthes cinctipes
miRNA family: mir-1297
source: miRNEST

Taxonomy by NCBI:
Petrolisthes cinctipes Petrolisthes Porcellanidae Galatheoidea Anomura Pleocyemata Decapoda Eucarida Eumalacostraca Malacostraca Crustacea Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTCAGGTAATTCAGGTACTTC

miRNA*
GGTAATTGAGTCCTTAATA

mismatches: 2
bulges: 2

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pre-miRNA
GCAATAATATGAGGTAATTGAGTCCTTAATAATCGTACTGGGAGTCACCAGCTATGGCTGAATTGAATCTGTGATTTCTGGTACATGTATTCAGGTAATT
CAGGTACTTC
ATTTACTAT


dot-bracket secondary structure
........((((((((.(((((((((.((((...((((((((((((((((((....))))..........))))))))))))))...)))).)))..)))
))).))))))
)).......



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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