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Species belonging to selected taxon:

Agrostis stolonifera, Avena barbata, Avena sativa, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Pseudoroegneria spicata, Triticum monococcum, Triticum turgidum subsp. durum, Brachypodium distachyon, Triticum aestivum



ABOUT THIS RECORD

ID: MNEST001060
species: Hordeum vulgare
miRNA family: MIR1122
source: miRNEST

Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TACTCCCTCCGTTCCAAAATA

miRNA*
TTTTGGGACGGAGGGAGTACT

mismatches: 0
bulges: 0

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pre-miRNA
CTACTCTATTATACTCCCTCCGTTCCAAAATAAGTGACTCAAGCTTAGTACAACTTTGTACTAGAGCTAGTACAAAGTTGTGACACTTATTTTGGGACGG
AGGGAGTACT
ACTCTACG


dot-bracket secondary structure
...........(((((((((((((((((((((((((............(((((((((((((((....))))))))))))))).)))))))))))))))))
))))))))..
........



SIMILARITIES
miRBase osa-MIR1862c: 0.000006

PMRD hpr-miR1120: 0.000000002

microPC miR1439: 8e-36
UniProt no hits

RFAM MIR1122: 4e-35
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
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