miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Leucoraja erinacea, Torpedo californica



ABOUT THIS RECORD

ID: MNEST009431
species: Leucoraja erinacea
miRNA family: miR-3091
source: miRNEST

Taxonomy by NCBI:
Leucoraja erinacea Leucoraja Rajinae Rajidae Rajiformes Batoidea Pristiorajea Hypnosqualea Squalea Neoselachii Elasmobranchii Chondrichthyes Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CATGGGTCTGGTTGGGCCCGC

miRNA*
GGGCCTGACCAGTCTCAAGAC

mismatches: 3
bulges: 0

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pre-miRNA
ATGGCCGAGAGTGCTTGCGGGCCATGGGTCTGGTTGGGCCCGCAGACTCGGAGTGCGGGCCTGACCAGTCTCAAGACCTGCGTGGTAACTCTGCAG

dot-bracket secondary structure
...((.(((..((((.(((((...((((.(((((((((((((((.........))))))))))))))).))))...)))))..)))).))).))..


SIMILARITIES
miRBase mmu-mir-3091: 1e-37

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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