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Species belonging to selected taxon:
Nasonia vitripennis
,
Nasonia giraulti
ABOUT THIS RECORD
ID:
MNEST037592
species:
Nasonia giraulti
miRNA family:
mir-317
source:
miRBase, original name:
ngi-mir-317
(
MI0016649
)
Taxonomy by NCBI:
Nasonia giraulti
Nasonia
Pteromalinae
Pteromalidae
Chalcidoidea
Chaldicoidea group
Apocrita
Hymenoptera
Endopterygota
Neoptera
Pterygota
Dicondylia
Insecta
Hexapoda
Pancrustacea
Mandibulata
Arthropoda
Panarthropoda
Protostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGAACACAGCTGGTGGTATCTCAGT
miRNA*
AGGGAGCCACTCTGCGTTCACT
mismatches:
2
bulges:
3
View larger
pre-miRNA
CTCGGAGAAC
AGGGAGCCACTCTGCGTTCACT
CGGTAAGTAAAGAAGCGGG
TGAACACAGCTGGTGGTATCTCAGT
TTTCTGAGGGC
dot-bracket secondary structure
((((((((((
.(((((((((((((.(((((((
((.(.........).))))
))))).)))..)))))).)))).))
))))))))...
SIMILARITIES
miRBase
nvi-mir-317
:
6e-42
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-317: 7e-36
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
references
[
1
] Sathyamurthy G, Swamy NR,
Int J Insect Sci. 2:1-13(2010).
,
"Computational Identification and Characterization of Putative miRNAs in Nasonia Species"