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Species belonging to selected taxon:

Nasonia vitripennis, Nasonia giraulti



ABOUT THIS RECORD

ID: MNEST037628
species: Nasonia vitripennis
miRNA family: bantam
source: miRBase, original name: nvi-bantam (MI0014757)

Taxonomy by NCBI:
Nasonia vitripennis Nasonia Pteromalinae Pteromalidae Chalcidoidea Chaldicoidea group Apocrita Hymenoptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGAGATCATTGTGAAAGCTGATT

miRNA*
CTGGTTTTCACAATGATTTGACAGA

mismatches: 2
bulges: 2

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pre-miRNA
ATATAGACGAAACTGGTTTTCACAATGATTTGACAGATGTATTTGATTCTGAGATCATTGTGAAAGCTGATTTTGTTCCGAATTCAG

dot-bracket secondary structure
.....(((((((..(((((((((((((((((..((((..........)))))))))))))))))))))..)))))))..........


SIMILARITIES
miRBase tca-bantam: 9e-32

PMRD no hits

microPC no hits
UniProt no hits

RFAM bantam: 5e-43

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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references

[1] Werren JH, Richards S, Desjardins CA, Niehuis O, Gadau J, Colbourne JK, Werren JH, Richards S, Desjardins CA, Niehuis O, Gadau J, Colbourne JK, Beukeboom LW, Desplan C, Elsik CG, Grimmelikhuijzen CJ, Kitts P, Lynch JA, Murphy T, Oliveira DC, Smith CD, van, Science. 327:343-348(2010)., "Functional and evolutionary insights from the genomes of three parasitoid Nasonia species"




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