ABOUT THIS RECORDspecies: Anopheles gambiae
miRNA family: mir-11
source: miRBase, original name: aga-mir-11 (MI0008306)
Taxonomy by NCBI:
Anopheles gambiae gambiae species complex Pyretophorus Cellia Anopheles Anophelinae Culicidae Culicoidea Culicimorpha Nematocera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CATCACAGTCTGAGTTCTTGCT miRNA* CAAGAACTTGGAACTGTGATCTG mismatches: 3 bulges: 1 |
pre-miRNA
GCATCCGGCAAGAACTTGGAACTGTGATCTGTGTGGTTATTAGCCGCGTTCGAAGCTCTTCACATCACAGTCTGAGTTCTTGCTCGATGG
dot-bracket secondary structure
.((((.((((((((((..((.(((((((....(((((.....)))))....(((....)))..)))))))))..)))))))))).)))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Mead EA, Tu Z, BMC Genomics. 9:244(2008)., "Cloning, characterization, and expression of microRNAs from the Asian malaria mosquito, Anopheles stephensi"
GCATCCGGCAAGAACTTGGAACTGTGATCTGTGTGGTTATTAGCCGCGTTCGAAGCTCTTCACATCACAGTCTGAGTTCTTGCTCGATGG
dot-bracket secondary structure
.((((.((((((((((..((.(((((((....(((((.....)))))....(((....)))..)))))))))..)))))))))).)))).
SIMILARITIES| miRBase cqu-mir-11: 0.00000002 PMRD no hits microPC no hits | UniProt no hits RFAM mir-11: 8e-45 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Mead EA, Tu Z, BMC Genomics. 9:244(2008)., "Cloning, characterization, and expression of microRNAs from the Asian malaria mosquito, Anopheles stephensi"
