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Species belonging to selected taxon:

Rana catesbeiana



ABOUT THIS RECORD

ID: MNEST009457
species: Rana catesbeiana
miRNA family: mir-154
source: miRNEST

Taxonomy by NCBI:
Rana catesbeiana Aquarana Aquarana/sylvatica group Novirana Rana Raninae Ranidae Ranoidea Neobatrachia Anura Batrachia Amphibia Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GGAGAAAGCATCCTTGGTGTC

miRNA*
TACTCAGTGTTCTCTCCCT

mismatches: 2
bulges: 2

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pre-miRNA
AATGATACTCAGTGTTCTCTCCCTGAGATCTTCCTCAGATAGCTCTCTGTCCAGTTTGCTAGATCTGATCTTTCCCGTATCCTCTTCATCCACCTGAGAA
TTAGCACTCCAGGAGGCAGTGGGCTCTGGGATATTGATTTCTGGAGAAAGCATCCTTGGTGTCCC


dot-bracket secondary structure
...((((((.((((((.(((((..((((((.(((.((((..((((.(((((.....((((((.(((..............................))).
))))))........))))).)))))))))))....)))))).))))).))))..)).))))))..



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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