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Species belonging to selected taxon:

Rana catesbeiana



ABOUT THIS RECORD

ID: MNEST009464
species: Rana catesbeiana
miRNA family: miR-3126
source: miRNEST

Taxonomy by NCBI:
Rana catesbeiana Aquarana Aquarana/sylvatica group Novirana Rana Raninae Ranidae Ranoidea Neobatrachia Anura Batrachia Amphibia Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGAGGGTCAGATGACAGAAGA

miRNA*
TTTTTTTTTCTGCCACTAAAG

mismatches: 3
bulges: 2

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pre-miRNA
AAGGAAAGTTTTGAGGGTCAGATGACAGAAGACAACATTGAAGTTGGTATTTGCAATGAAGCTGGATTTAAGCGACTCACTCCTGCTGAAGTCAAAGATT
ACTTAGCTGCTATAGCATAAAAGGCTTCCAGTCCTGTGTAGTGTTTTTTTTTTTCTGCCACTAAAGGATTCAA


dot-bracket secondary structure
...(((..((((.((((.((((.((.((((((((((((.((((((......(((.(((.((((.(((((.((((.........)))).))))).(((...
.)))))))..))).))).....)))))).......))))..)))))))).)).)))))).)).)))).)))..



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt sp|P24495|PSA2_XENLA: 0.000000000000002

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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