miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Rana catesbeiana



ABOUT THIS RECORD

ID: MNEST009460
species: Rana catesbeiana
miRNA family: miR-1933
source: miRNEST

Taxonomy by NCBI:
Rana catesbeiana Aquarana Aquarana/sylvatica group Novirana Rana Raninae Ranidae Ranoidea Neobatrachia Anura Batrachia Amphibia Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CCAGGACAATCAGGGTGACTC

miRNA*
TTTCCTTTAATTTCCTTACC

mismatches: 5
bulges: 1

View larger
pre-miRNA
ACGTGTATGTCCCATTTGGGGAGATTTCCTTTAATTTCCTTACCAGTAGAAGTAATGGGGTTTCAAAGAGGAGCATAGAATTTTGAATGTCCCACCACCA
ATCACCATCATCAATTCTGGAAGTCCCAATACTACTGGTCACCAGGACAATCAGGGTGACTCTCACCAACGGGTGACACAGCGATAAAATC


dot-bracket secondary structure
.(((...((((((..((((.((((.((.((((.(((((((.((((((...((((.(((((((((..((((.............(((.((.........))
.)))..........)))).))))))))).))))))))))....)))).))).)))).)).)))).))))..)).))))..)))........



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





Liczniki na strone;