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Species belonging to selected taxon:

Citrus aurantium, Citrus reticulata, Citrus sinensis, Citrus unshiu, Paullinia cupana var. sorbilis, Citrus clementina



ABOUT THIS RECORD

ID: MNEST000363
species: Citrus aurantium
miRNA family: MIR482
source: miRNEST

Taxonomy by NCBI:
Citrus aurantium Citrus Rutaceae Sapindales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCTTCCCTACTCCACCCATGC

miRNA*
 ATGGGTGAGTAGGGAAGATA

mismatches: 0
bulges: 1
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pre-miRNA
 AGTAATGGAGAGGGAGTTGAAGGATATTGGGAAGGTTTTGGTATGGGTGAGTAGGGAAGATAATTTAACTAAGTAATAATAATATCACTTTTTTTATTAT
TACTATTTACTTAAGGAATTTGTATATCTTCCCTACTCCACCCATGCCATAGGTTTCCCATTATTCCTCCCTCTCCTTATCTCACC

dot-bracket secondary structure
.((((.((((((((((.....(((((.(((((((.((.((((((((((((((((((((((((.(((((.((((((.((((((((..........))))))
)).)))))).))))).........))))))))))))).))))))))))).)).))))))).)))))))))))))))))))......


SIMILARITIES
miRBase ptc-MIR472a: 0.0006

PMRD ptc-miR472a: 0.0006

microPC miR482: 6e-41		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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