miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Gallus gallus, Taeniopygia guttata, Meleagris gallopavo, Lonchura striata domestica



ABOUT THIS RECORD

ID: MNEST006728
species: Gallus gallus
miRNA family: miR-3533
source: miRNEST

Taxonomy by NCBI:
Gallus gallus Gallus Phasianinae Phasianidae Galliformes Neognathae Aves Coelurosauria Theropoda Saurischia Dinosauria Archosauria Sauria Sauropsida Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ATGAAGTGTGATGTGGATAT

miRNA*
ATCCATGANACTACCTTCAACT

mismatches: 4
bulges: 2

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pre-miRNA
GGAGTCCTGTGGTATCCATGANACTACCTTCAACTCCATCATGAAGTGTGATGTGGATATCCGTAACGAT

dot-bracket secondary structure
...((..((.((((((((((..((...(((((.........))))).))..))))))))))))..))...


SIMILARITIES
miRBase gga-mir-3533: 4e-30

PMRD no hits

microPC no hits
UniProt sp|Q6P378|ACTG_XENTR: 0.000009

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
Source sequences
download this record





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