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Species belonging to selected taxon:

Nicotiana benthamiana, Nicotiana langsdorffii x Nicotiana sanderae, Nicotiana tabacum, Petunia axillaris subsp. axillaris, Solanum habrochaites, Solanum lycopersicum, Solanum melongena, Solanum pennellii, Solanum torvum, Capsicum annuum, Solanum tuberosum



ABOUT THIS RECORD

ID: MNEST054658
species: Solanum tuberosum
source: PMRD, original name: stu-miR156c

Taxonomy by NCBI:
Solanum tuberosum Solanum Solaneae Solanoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGACAGAAGAGAGAGAGCAC

miRNA*
 CACCTCGATTAAA

mismatches: 12
bulges: 1
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pre-miRNA
 TGACAGAAGAGAGAGAGCACGAGGAAATTCCGGTCCTGTAGCCATATTGAACATGGATTCCTTGGCACCTCGATTAAAAACCTCG

dot-bracket secondary structure
..........(((.(.((.(((((((..((((.((..(((....))).))...))))))))))))).))))..............


SIMILARITIES
miRBase zma-MIR156j: 0.0002

PMRD stu-miR157b: 4e-43

microPC miR157: 0.0002		UniProt no hits

RFAM no hits

Identical with: stu-miR157b from PMRD (MNEST054662)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
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