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Species belonging to selected taxon:

Nicotiana benthamiana, Nicotiana langsdorffii x Nicotiana sanderae, Nicotiana tabacum, Petunia axillaris subsp. axillaris, Solanum habrochaites, Solanum lycopersicum, Solanum melongena, Solanum pennellii, Solanum torvum, Capsicum annuum, Solanum tuberosum



ABOUT THIS RECORD

ID: MNEST054659
species: Solanum tuberosum
source: PMRD, original name: stu-miR156d

Taxonomy by NCBI:
Solanum tuberosum Solanum Solaneae Solanoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGACAGAAGAGAGAGAGCAC

miRNA*
 GCCTTGCATGAACTGGAA

mismatches: 10
bulges: 2
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pre-miRNA
 TGACAGAAGAGAGAGAGCACGATCAGAATCAACAATATCATTTAATCCACTGGAGAAGATCTTTTGTCCGCTGCTAGAAATTCCTGCTGCAGAAGTGGGA
TGTTCAAAAAGTGGCTGGCAGATTGAAGAAGATTCAGTCAGACTATGATCACTGCCTTGCATGAACTGGAA

dot-bracket secondary structure
...(((......(((.(((.(((((...((.........((((..(((...)))..))))....((((.((..((.(((..(((..((.....))..)))
..)))....))..)).))))(((((((.....))))))).))...)))))..)))))).......)))...


SIMILARITIES
miRBase zma-MIR156j: 0.0005

PMRD gra-miR157c: 0.000009

microPC miR157: 0.0005		UniProt no hits

RFAM no hits

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
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