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Species belonging to selected taxon:

Nicotiana benthamiana, Nicotiana langsdorffii x Nicotiana sanderae, Nicotiana tabacum, Petunia axillaris subsp. axillaris, Solanum habrochaites, Solanum lycopersicum, Solanum melongena, Solanum pennellii, Solanum torvum, Capsicum annuum, Solanum tuberosum



ABOUT THIS RECORD

ID: MNEST007398
species: Solanum tuberosum
miRNA family: MIR403
source: miRNEST

Taxonomy by NCBI:
Solanum tuberosum Solanum Solaneae Solanoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CTAGATTCACGCACAAACTCG

miRNA*
 CGTTTGTGCGTGAATCTAACA

mismatches: 4
bulges: 0
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pre-miRNA
 AGAAATGGAAAATCAGGAAGAGGCATATTTCACGTTTGTGCGTGAATCTAACAACCCTTTTCATCAGAAAAACTGTTGTTGTTTGCTAGATTCACGCACA
AACTCGTAATATGTATTTTTCGAATATCTGCGCTT

dot-bracket secondary structure
......(((......((((((.(((((((....((((((((((((((((((((((..(((((....)))))...))))).......))))))))))))))
)))....))))))).)))))).....)))......


SIMILARITIES
miRBase tcc-MIR403a: 0.0000004

PMRD stu-miR403: 2e-55

microPC miR403: 1e-35		UniProt no hits

RFAM MIR403: 0.0000005		most similar mature miRNAs

Identical with: stu-miR403 from PMRD (MNEST054669)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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