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Species belonging to selected taxon:

Ipomoea batatas, Nicotiana benthamiana, Nicotiana langsdorffii x Nicotiana sanderae, Nicotiana tabacum, Petunia axillaris subsp. axillaris, Solanum habrochaites, Solanum lycopersicum, Solanum melongena, Solanum pennellii, Solanum torvum, Capsicum annuum, Solanum tuberosum, Ipomoea nil



ABOUT THIS RECORD

ID: MNEST001277
species: Ipomoea batatas
miRNA family: MIR2911
source: miRNEST

Taxonomy by NCBI:
Ipomoea batatas Ipomoea Ipomoeeae Convolvulaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GGCCGGGGGACGGACTGGGAA

miRNA*
CCCAGTCCCGAACCCGTCGG

mismatches: 5
bulges: 1

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pre-miRNA
TCTGAGGGCTGGGCACGGGGGTCCCAGTCCCGAACCCGTCGGCTGTTCGGCGGACTGCTCGAGCTGCTTCCGCGGCGAGAGCGGGTCGCCGCGTGCCGGC
CGGGGGACGGACTGGGAA
CGGCTCCTTCGGGGGCCTT


dot-bracket secondary structure
((((...((...)).))))..(((((((((....(((((((((....((((((.((((((..(((((....)))))..)))))).))))))...))))).
))))....))))))))).
.((((((....))))))..



SIMILARITIES
miRBase peu-MIR2911: 9e-33

PMRD peu-miR2911: 9e-33

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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Liczniki na strone;