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Species belonging to selected taxon:

Ipomoea batatas, Nicotiana benthamiana, Nicotiana langsdorffii x Nicotiana sanderae, Nicotiana tabacum, Petunia axillaris subsp. axillaris, Solanum habrochaites, Solanum lycopersicum, Solanum melongena, Solanum pennellii, Solanum torvum, Capsicum annuum, Solanum tuberosum, Ipomoea nil



ABOUT THIS RECORD

ID: MNEST045968
species: Solanum tuberosum
miRNA family: MIR157
source: microPC, original name: miR157

Taxonomy by NCBI:
Solanum tuberosum Solanum Solaneae Solanoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTGACAGAAGATAGAGAGCAC

miRNA*
 GCTCTCTATGCTTCTGTCA

mismatches: 1
bulges: 1
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pre-miRNA
 TTGACAGAAGATAGAGAGCACTAATGATGATATGCTAATTTCATTCAGCAAAAGCATCTCACTTCATTTGTGCTCTCTATGCTTCTGTCA

dot-bracket secondary structure
.((((((((((((((((((((.((((((((.(((((................))))).)))..))))).))))))))))).)))))))))


SIMILARITIES
miRBase sly-MIR156a: 6e-30

PMRD stu-miR157a: 4e-46

microPC miR157: 2e-45		UniProt no hits

RFAM no hits

Identical with: stu-miR157a from PMRD (MNEST054661)

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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Liczniki na strone;