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Species belonging to selected taxon:

Ipomoea batatas, Nicotiana benthamiana, Nicotiana langsdorffii x Nicotiana sanderae, Nicotiana tabacum, Petunia axillaris subsp. axillaris, Solanum habrochaites, Solanum lycopersicum, Solanum melongena, Solanum pennellii, Solanum torvum, Capsicum annuum, Solanum tuberosum, Ipomoea nil



ABOUT THIS RECORD

ID: MNEST046134
species: Solanum tuberosum
miRNA family: MIR156
source: microPC, original name: miR156

Taxonomy by NCBI:
Solanum tuberosum Solanum Solaneae Solanoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGACAGAAGAGAGTGAGCAC

miRNA*
 GCTCACTTCTCATTCTGTCA

mismatches: 1
bulges: 2
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pre-miRNA
 TGACAGAAGAGAGTGAGCACACGCAGTCGAATTGTATAAACATTTATACAATTGTCATTTGCGTGTGCTCACTTCTCATTCTGTCA

dot-bracket secondary structure
.(((((((((((((((((((((((((..(((((((((((....)))))))))..))..)))))))))))))).)))).))))))).


SIMILARITIES
miRBase ctr-MIR156: 0.00000006

PMRD stu-miR156a: 1e-43

microPC miR156: 1e-43		UniProt no hits

RFAM mir-156: 0.000001

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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Liczniki na strone;