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Species belonging to selected taxon:
Solanum habrochaites
,
Solanum lycopersicum
,
Solanum melongena
,
Solanum pennellii
,
Solanum torvum
,
Solanum tuberosum
ABOUT THIS RECORD
ID:
MNEST046015
species:
Solanum tuberosum
miRNA family:
MIR399
source:
microPC, original name:
miR399
Taxonomy by NCBI:
Solanum tuberosum
Solanum
Solaneae
Solanoideae
Solanaceae
Solanales
lamiids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGCCAAAGGAGAGCTGCCCTG
miRNA*
GGGCTACTCTCTATTGGCATG
mismatches:
3
bulges:
0
View larger
pre-miRNA
TA
GGGCTACTCTCTATTGGCATG
CAGTGATATATTTAAGCTGACA
TGCCAAAGGAGAGCTGCCCTG
dot-bracket secondary structure
((
((((..((((((.((((((((
((((..((....)).)))).))
)))))).))))))..))))))
SIMILARITIES
miRBase
sly-MIR399
:
0.0000002
PMRD
sly-miR399
:
0.0000002
microPC
miR399
:
1e-30
UniProt
no hits
RFAM
mir-399: 0.0002
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
download this record